KWZ74536.1 protein (Winkia neuii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KWZ74536.1

Copper-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00. (797 aa)

Predicted Functional Partners:

KWZ74537.1

0.994

KWZ74535.1

0.675

KWZ74538.1

0.565

KWZ73939.1

0.525

ribD

0.495

KWZ73937.1

0.474

pgk

0.472

dnaK

0.451

KWZ74539.1

0.420

KWZ74540.1

0.420

Your Current Organism:

Winkia neuii

NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KWZ73937.1	KWZ73939.1	HMPREF3198_01094	HMPREF3198_01096	Putative cadmium, cobalt and zinc/H(+)-K(+) antiporter; KEGG: eci:UTI89_C0749 6.6e-45 zinc transporter ZitB K03295; Psort location: CytoplasmicMembrane, score: 10.00.	Transcriptional repressor SmtB family protein; KEGG: pfe:PSF113_5488 6.1e-06 transcriptional regulator, ArsR family / Methyltransferase fusion; Psort location: Cytoplasmic, score: 7.50.	0.716
KWZ73937.1	KWZ74536.1	HMPREF3198_01094	HMPREF3198_00711	Putative cadmium, cobalt and zinc/H(+)-K(+) antiporter; KEGG: eci:UTI89_C0749 6.6e-45 zinc transporter ZitB K03295; Psort location: CytoplasmicMembrane, score: 10.00.	Copper-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.	0.474
KWZ73939.1	KWZ73937.1	HMPREF3198_01096	HMPREF3198_01094	Transcriptional repressor SmtB family protein; KEGG: pfe:PSF113_5488 6.1e-06 transcriptional regulator, ArsR family / Methyltransferase fusion; Psort location: Cytoplasmic, score: 7.50.	Putative cadmium, cobalt and zinc/H(+)-K(+) antiporter; KEGG: eci:UTI89_C0749 6.6e-45 zinc transporter ZitB K03295; Psort location: CytoplasmicMembrane, score: 10.00.	0.716
KWZ73939.1	KWZ74536.1	HMPREF3198_01096	HMPREF3198_00711	Transcriptional repressor SmtB family protein; KEGG: pfe:PSF113_5488 6.1e-06 transcriptional regulator, ArsR family / Methyltransferase fusion; Psort location: Cytoplasmic, score: 7.50.	Copper-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.	0.525
KWZ74535.1	KWZ74536.1	HMPREF3198_00710	HMPREF3198_00711	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	Copper-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.	0.675
KWZ74535.1	KWZ74537.1	HMPREF3198_00710	HMPREF3198_00712	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	Putative copper chaperone CopZ; Psort location: Cytoplasmic, score: 7.50.	0.503
KWZ74535.1	KWZ74538.1	HMPREF3198_00710	HMPREF3198_00713	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	Putative adenylosuccinate lyase; Psort location: Cytoplasmic, score: 7.50.	0.490
KWZ74536.1	KWZ73937.1	HMPREF3198_00711	HMPREF3198_01094	Copper-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.	Putative cadmium, cobalt and zinc/H(+)-K(+) antiporter; KEGG: eci:UTI89_C0749 6.6e-45 zinc transporter ZitB K03295; Psort location: CytoplasmicMembrane, score: 10.00.	0.474
KWZ74536.1	KWZ73939.1	HMPREF3198_00711	HMPREF3198_01096	Copper-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.	Transcriptional repressor SmtB family protein; KEGG: pfe:PSF113_5488 6.1e-06 transcriptional regulator, ArsR family / Methyltransferase fusion; Psort location: Cytoplasmic, score: 7.50.	0.525
KWZ74536.1	KWZ74535.1	HMPREF3198_00711	HMPREF3198_00710	Copper-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	0.675
KWZ74536.1	KWZ74537.1	HMPREF3198_00711	HMPREF3198_00712	Copper-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.	Putative copper chaperone CopZ; Psort location: Cytoplasmic, score: 7.50.	0.994
KWZ74536.1	KWZ74538.1	HMPREF3198_00711	HMPREF3198_00713	Copper-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.	Putative adenylosuccinate lyase; Psort location: Cytoplasmic, score: 7.50.	0.565
KWZ74536.1	KWZ74539.1	HMPREF3198_00711	HMPREF3198_00714	Copper-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.	Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.	0.420
KWZ74536.1	KWZ74540.1	HMPREF3198_00711	HMPREF3198_00715	Copper-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.	Hypothetical protein.	0.420
KWZ74536.1	dnaK	HMPREF3198_00711	HMPREF3198_00206	Copper-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.	Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	0.451
KWZ74536.1	pgk	HMPREF3198_00711	HMPREF3198_01983	Copper-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.	Phosphoglycerate kinase; KEGG: mcu:HMPREF0573_11609 1.2e-157 pgk; phosphoglycerate kinase K00927; Psort location: Cytoplasmic, score: 9.97.	0.472
KWZ74536.1	ribD	HMPREF3198_00711	HMPREF3198_01297	Copper-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.	0.495
KWZ74537.1	KWZ74535.1	HMPREF3198_00712	HMPREF3198_00710	Putative copper chaperone CopZ; Psort location: Cytoplasmic, score: 7.50.	Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.	0.503
KWZ74537.1	KWZ74536.1	HMPREF3198_00712	HMPREF3198_00711	Putative copper chaperone CopZ; Psort location: Cytoplasmic, score: 7.50.	Copper-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.	0.994
KWZ74537.1	KWZ74538.1	HMPREF3198_00712	HMPREF3198_00713	Putative copper chaperone CopZ; Psort location: Cytoplasmic, score: 7.50.	Putative adenylosuccinate lyase; Psort location: Cytoplasmic, score: 7.50.	0.763