STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74198.1Hypothetical protein. (43 aa)    
Predicted Functional Partners:
whiB-2
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
       0.562
KWZ74196.1
Ser/Thr phosphatase family protein; KEGG: ase:ACPL_8118 1.3e-48 putative metallophosphoesterase.
       0.524
KWZ74197.1
Transglycosylase; KEGG: iva:Isova_2701 2.4e-136 peptidoglycan glycosyltransferase; Psort location: CytoplasmicMembrane, score: 9.51.
       0.524
KWZ74200.1
Hypothetical protein.
       0.407
KWZ74201.1
Endoribonuclease L-PSP; KEGG: cnc:CNE_1c25480 5.9e-21 translation initiation inhibitor YjgF-family; Psort location: Cytoplasmic, score: 7.50.
       0.407
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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