STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74210.1Helicase/secretion neighborhood ATPase; KEGG: pen:PSEEN0648 2.7e-55 type II/IV secretion system protein E K02283; Psort location: Cytoplasmic, score: 9.97. (366 aa)    
Predicted Functional Partners:
KWZ74211.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
  
 0.909
KWZ74918.1
Bacterial type II secretion system protein F domain protein; KEGG: rsa:RSal33209_1351 1.9e-15 tyrosine phenol-lyase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.851
KWZ74209.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16.
       0.773
KWZ74212.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
     
 0.680
KWZ74208.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.548
KWZ74917.1
Bacterial type II secretion system protein F domain protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.509
KWZ74213.1
Hypothetical protein; KEGG: mgi:Mflv_2643 0.0015 ribokinase K00852; Psort location: CytoplasmicMembrane, score: 9.55.
       0.497
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
      0.446
KWZ74920.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
    0.427
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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