STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74249.1Transposase, IS4 family; KEGG: sbh:SBI_01547 1.0e-07 oxidoreductase; K00215 dihydrodipicolinate reductase; Psort location: Cytoplasmic, score: 7.50. (130 aa)    
Predicted Functional Partners:
KWZ74248.1
Transposase family protein, IS5 family; KEGG: bid:Bind_3797 4.8e-05 mannitol dehydrogenase domain-containing protein; K00045 mannitol 2-dehydrogenase.
     0.988
KWZ74250.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.682
KWZ74251.1
KEGG: crd:CRES_0890 1.4e-195 metK2; S-adenosylmethionine synthetase K00789; Psort location: Cytoplasmic, score: 9.97; Belongs to the AdoMet synthase family.
       0.453
KWZ74252.1
KEGG: crd:CRES_1553 5.3e-210 DNA methylase; Psort location: Cytoplasmic, score: 7.50.
       0.453
KWZ74247.1
Hypothetical protein.
       0.404
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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