STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74277.1Cpl-7 lysozyme protein. (280 aa)    
Predicted Functional Partners:
KWZ74273.1
Phage minor structural protein.
 
     0.872
KWZ74272.1
Hypothetical protein.
 
     0.853
KWZ74271.1
Tape measure domain protein; KEGG: cva:CVAR_0875 2.5e-14 signal transduction histidine kinase; Psort location: Cytoplasmic, score: 7.50.
 
     0.829
KWZ74276.1
Toxin secretion/phage lysis holin; Psort location: CytoplasmicMembrane, score: 8.16.
       0.781
KWZ74454.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.777
KWZ74455.1
Phage minor structural protein; KEGG: ase:ACPL_342 5.1e-05 Pierisin.
 
     0.764
KWZ74453.1
Tape measure domain protein; KEGG: cva:CVAR_0875 7.6e-12 signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.750
KWZ75633.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.721
KWZ74427.1
Phage/plasmid primase, P4 family domain protein; KEGG: gva:HMPREF0424_0874 1.0e-29 nucleoside triphosphatase, D5 family.
  
     0.714
KWZ74238.1
Phage/plasmid primase, P4 family domain protein; KEGG: gva:HMPREF0424_0874 7.8e-28 nucleoside triphosphatase, D5 family; Psort location: Cytoplasmic, score: 7.50.
  
     0.707
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.