STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74345.1Membrane protein; Psort location: CytoplasmicMembrane, score: 10.00. (350 aa)    
Predicted Functional Partners:
KWZ74344.1
Hypothetical protein.
       0.773
KWZ74343.1
Hypothetical protein.
       0.563
KWZ74978.1
Signal peptide protein, YSIRK family; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.490
KWZ72984.1
Hypothetical protein.
  
     0.455
KWZ73048.1
Hypothetical protein; KEGG: bha:BH1667 0.0087 aroE; 3-phosphoshikimate 1-carboxyvinyltransferase K00800.
  
     0.454
KWZ74182.1
KEGG: cfl:Cfla_3436 1.1e-74 protoporphyrinogen oxidase K00231; Psort location: Cytoplasmic, score: 9.89.
  
     0.414
KWZ72608.1
e1-E2 ATPase; KEGG: bcv:Bcav_1945 2.6e-169 P-type HAD superfamily ATPase; K01552; Psort location: CytoplasmicMembrane, score: 10.00.
   
   0.413
KWZ72754.1
Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: bcv:Bcav_2236 1.2e-31 FKBP-type peptidylprolyl isomerase; K01802 peptidylprolyl isomerase; Psort location: Cytoplasmic, score: 7.50.
  
     0.407
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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