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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74361.1Hypothetical protein; KEGG: bqy:MUS_3662 2.0e-13 yvgT; thioredoxin reductase; Psort location: CytoplasmicMembrane, score: 10.00. (264 aa)    
Predicted Functional Partners:
KWZ74362.1
KEGG: ame:408900 0.00024 protein tyrosine phosphatase 61F ortholog; K05696 protein tyrosine phosphatase, non-receptor type 1; Psort location: Cytoplasmic, score: 7.50; Belongs to the SOS response-associated peptidase family.
       0.773
KWZ74360.1
Transcriptional regulator, GntR family; KEGG: cnc:CNE_2c19120 4.8e-09 phnA2; phosphonoacetate hydrolase PhnA; Psort location: Cytoplasmic, score: 7.50.
       0.620
KWZ74363.1
Hypothetical protein; KEGG: bbb:BIF_01573 3.4e-48 3-oxoacyl-ACP synthase.
       0.522
KWZ74364.1
Amidohydrolase; KEGG: ica:Intca_2883 6.9e-114 amidohydrolase K01451.
       0.490
KWZ74359.1
BNR/Asp-box repeat protein; KEGG: ckp:ckrop_1872 1.6e-192 nanI; exo-alpha-sialidase K01186; Psort location: Extracellular, score: 8.19.
       0.433
KWZ73112.1
Ribonuclease BN-like family protein; KEGG: hel:HELO_2551 4.6e-07 rbn; tRNA-processing ribonuclease BN K07058; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.413
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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