STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74363.1Hypothetical protein; KEGG: bbb:BIF_01573 3.4e-48 3-oxoacyl-ACP synthase. (262 aa)    
Predicted Functional Partners:
KWZ74364.1
Amidohydrolase; KEGG: ica:Intca_2883 6.9e-114 amidohydrolase K01451.
       0.625
rpsL
Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
  
   0.602
KWZ74361.1
Hypothetical protein; KEGG: bqy:MUS_3662 2.0e-13 yvgT; thioredoxin reductase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.519
KWZ74362.1
KEGG: ame:408900 0.00024 protein tyrosine phosphatase 61F ortholog; K05696 protein tyrosine phosphatase, non-receptor type 1; Psort location: Cytoplasmic, score: 7.50; Belongs to the SOS response-associated peptidase family.
       0.515
KWZ74765.1
FG-GAP repeat protein; KEGG: noc:Noc_1762 1.1e-24 Integrins alpha chain.
    
   0.511
KWZ74643.1
Hypothetical protein.
    
   0.511
KWZ74399.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: bbp:BBPR_0025 8.7e-09 alpha-L-arabinofuranosidase; Psort location: Cellwall, score: 9.26.
    
   0.511
KWZ72028.1
FG-GAP repeat protein; KEGG: npu:Npun_F1457 1.2e-28 outer membrane adhesin-like protein; Psort location: CytoplasmicMembrane, score: 9.87.
    
   0.511
rpsD
Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
  
 
 0.507
rpmD
Ribosomal protein L30; KEGG: apb:SAR116_2409 5.7e-07 50S ribosomal protein L30 K02907; Psort location: Cytoplasmic, score: 9.67.
   
   0.483
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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