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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylAXylose isomerase; KEGG: bad:BAD_0422 6.7e-187 xylA; xylose isomerase K01805; Psort location: Cytoplasmic, score: 9.97; Belongs to the xylose isomerase family. (480 aa)    
Predicted Functional Partners:
KWZ74393.1
Xylulokinase; KEGG: bcv:Bcav_3306 9.4e-117 xylulokinase; K00854 xylulokinase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.997
KWZ73195.1
Carbohydrate kinase, FGGY family protein; KEGG: pad:TIIST44_04730 2.3e-202 xylulokinase; K00854 xylulokinase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.948
KWZ74390.1
ROK family protein; KEGG: bde:BDP_0576 2.7e-48 NagC/XylR-type transciptional regulator; Psort location: Cytoplasmic, score: 9.95.
 
  
 0.932
KWZ72226.1
Beta galactosidase small chain; KEGG: cms:CMS_0924 1.4e-179 lacZ1; beta-galatosidase; Psort location: Cytoplasmic, score: 7.50.
    
 0.893
KWZ74772.1
Kinase, PfkB family; KEGG: mcu:HMPREF0573_11505 4.5e-94 putative fructokinase; K00847 fructokinase; Psort location: Cytoplasmic, score: 7.50.
     
 0.892
KWZ74118.1
Glycosyl hydrolase family 32; KEGG: mph:MLP_06620 6.6e-29 putative glycoside hydrolase K01193; Psort location: Cytoplasmic, score: 9.97.
    
 0.871
KWZ72865.1
Beta-galactosidase; KEGG: ach:Achl_0402 1.8e-129 beta-galactosidase K05350; Psort location: Cytoplasmic, score: 9.97; Belongs to the glycosyl hydrolase 1 family.
    
 0.859
KWZ75289.1
ROK family protein; KEGG: bcv:Bcav_3538 4.2e-43 ROK family protein; K00845 glucokinase; Psort location: Cytoplasmic, score: 9.97.
    
  0.843
KWZ74354.1
ROK family protein; KEGG: apv:Apar_0928 1.6e-64 ROK family protein; K00845 glucokinase; Psort location: Cytoplasmic, score: 9.97.
    
  0.835
KWZ74651.1
ROK family protein; KEGG: bde:BDP_2227 1.0e-19 transcriptional repressor, ROK family; Psort location: Cytoplasmic, score: 7.50.
    
 0.794
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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