STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74396.1Transcriptional regulator, TetR family; Psort location: CytoplasmicMembrane, score: 9.55. (201 aa)    
Predicted Functional Partners:
KWZ74395.1
YhgE/Pip domain protein; KEGG: cfu:CFU_3725 6.2e-12 hemagluttinin motif protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.871
KWZ74394.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.727
KWZ74397.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.560
KWZ74957.1
MaoC-like protein; KEGG: cef:CE0913 0. fasA; fatty-acid synthase I K11533; Psort location: Cytoplasmic, score: 9.95.
    
 0.538
KWZ72024.1
LPXTG-motif protein cell wall anchor domain protein; Psort location: Cellwall, score: 9.98.
  
     0.431
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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