STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74454.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (230 aa)    
Predicted Functional Partners:
KWZ74453.1
Tape measure domain protein; KEGG: cva:CVAR_0875 7.6e-12 signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.949
KWZ74455.1
Phage minor structural protein; KEGG: ase:ACPL_342 5.1e-05 Pierisin.
 
   0.946
KWZ74273.1
Phage minor structural protein.
 
   0.881
KWZ74277.1
Cpl-7 lysozyme protein.
 
     0.777
KWZ74460.1
Cpl-7 lysozyme protein; KEGG: crd:CRES_0867 2.7e-112 N-acetylmuramoyl-L-alanine amidase.
 
     0.777
KWZ74271.1
Tape measure domain protein; KEGG: cva:CVAR_0875 2.5e-14 signal transduction histidine kinase; Psort location: Cytoplasmic, score: 7.50.
 
    0.771
KWZ75633.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.737
KWZ74451.1
Hypothetical protein; KEGG: mcu:HMPREF0573_11357 9.4e-46 putative acyl-CoA thioester hydrolase; Psort location: Cytoplasmic, score: 7.50.
 
     0.685
KWZ74427.1
Phage/plasmid primase, P4 family domain protein; KEGG: gva:HMPREF0424_0874 1.0e-29 nucleoside triphosphatase, D5 family.
  
     0.626
KWZ72028.1
FG-GAP repeat protein; KEGG: npu:Npun_F1457 1.2e-28 outer membrane adhesin-like protein; Psort location: CytoplasmicMembrane, score: 9.87.
 
 
   0.602
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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