STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74458.1Toxin secretion/phage lysis holin; Psort location: CytoplasmicMembrane, score: 9.55. (151 aa)    
Predicted Functional Partners:
KWZ74460.1
Cpl-7 lysozyme protein; KEGG: crd:CRES_0867 2.7e-112 N-acetylmuramoyl-L-alanine amidase.
       0.781
KWZ74463.1
Resolvase protein; KEGG: apb:SAR116_1288 0.0051 Resolvase, N-terminal domain-containing protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.622
KWZ74459.1
Hypothetical protein.
       0.572
KWZ74464.1
Resolvase protein; KEGG: apb:SAR116_1288 0.0027 Resolvase, N-terminal domain-containing protein.
 
     0.563
KWZ74461.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.500
KWZ74462.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16.
       0.473
KWZ74281.1
Resolvase protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.403
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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