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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ74136.1MFS transporter, SP family; KEGG: ctu:CTU_09010 1.1e-106 iolT; major myo-inositol transporter iolT; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (501 aa)    
Predicted Functional Partners:
KWZ74137.1
AP endonuclease, family 2; KEGG: bcv:Bcav_0730 3.9e-88 xylose isomerase; K03335 inosose dehydratase; Psort location: Cytoplasmic, score: 7.50.
       0.516
KWZ74135.1
Oxidoreductase, NAD-binding domain protein; KEGG: sen:SACE_2908 7.9e-65 dehydrogenase myo-inositol 2-dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
       0.501
KWZ72988.1
KEGG: cfi:Celf_2792 2.4e-95 N-acetylglucosamine-6-phosphate deacetylase K01443; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.468
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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