STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73914.1Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. (254 aa)    
Predicted Functional Partners:
sepF
Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
  
 0.829
KWZ73915.1
DEAD/DEAH box helicase; KEGG: rop:ROP_67880 1.0e-220 helicase; Psort location: Cytoplasmic, score: 7.50.
       0.805
KWZ72546.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the multicopper oxidase YfiH/RL5 family.
  
  
 0.773
KWZ73917.1
Putative non-specific ribonucleoside hydrolase RihC; KEGG: elm:ELI_2205 6.7e-52 nucleoside hydrolase; K01239 purine nucleosidase; Psort location: Cytoplasmic, score: 7.50.
       0.752
KWZ72548.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.635
KWZ72549.1
DivIVA domain protein; KEGG: tgo:TGME49_115220 4.0e-07 rhoptry protein, putative; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.612
KWZ72580.1
Hypothetical protein; KEGG: zga:zobellia_3774 2.6e-08 pelA2; pectate lyase, family PL1; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.587
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
  
    0.564
KWZ73916.1
KEGG: mct:MCR_0505 7.7e-99 amino acid transport protein K03310; Psort location: CytoplasmicMembrane, score: 10.00.
       0.557
rpmC
Ribosomal protein L29; KEGG: apb:SAR116_2399 9.6e-05 50S ribosomal protein L29 K02904; Psort location: Cytoplasmic, score: 7.50; Belongs to the universal ribosomal protein uL29 family.
   
    0.522
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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