STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73847.1KEGG: hme:HFX_2720 3.7e-44 AP-endonuclease/AP-lyase. (330 aa)    
Predicted Functional Partners:
KWZ73846.1
Oxidoreductase, NAD-binding domain protein; KEGG: paw:PAZ_c04800 2.9e-122 iolG2; myo-inositol 2-dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.951
KWZ73848.1
KEGG: bst:GYO_4376 8.6e-68 protein IolH K06605; Psort location: Cytoplasmic, score: 7.50.
 
     0.922
KWZ73849.1
Oxidoreductase, NAD-binding domain protein; KEGG: pac:PPA0466 2.4e-159 myo-inositol 2-dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.853
KWZ74135.1
Oxidoreductase, NAD-binding domain protein; KEGG: sen:SACE_2908 7.9e-65 dehydrogenase myo-inositol 2-dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.757
iolG-2
Putative inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).
 
  
 0.652
KWZ73837.1
AP endonuclease, family 2; KEGG: bcv:Bcav_0730 3.8e-113 xylose isomerase; K03335 inosose dehydratase; Psort location: Cytoplasmic, score: 7.50.
  
     0.525
KWZ73845.1
Sugar-binding domain protein; KEGG: bcv:Bcav_0593 1.0e-30 LacI family transcriptional regulator K02529; Psort location: Cytoplasmic, score: 9.97.
  
    0.506
KWZ73844.1
Hypothetical protein.
       0.499
KWZ74137.1
AP endonuclease, family 2; KEGG: bcv:Bcav_0730 3.9e-88 xylose isomerase; K03335 inosose dehydratase; Psort location: Cytoplasmic, score: 7.50.
  
     0.459
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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