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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73857.1Hypothetical protein; KEGG: sta:STHERM_c03590 6.3e-104 isopentenyl-diphosphate delta-isomerase; Psort location: Cytoplasmic, score: 7.50. (580 aa)    
Predicted Functional Partners:
KWZ73856.1
Transporter, major facilitator family protein; KEGG: hse:Hsero_0990 2.1e-34 mmr; methylenomycin A resistance protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.762
KWZ73858.1
Putative esterase; KEGG: ase:ACPL_6631 9.6e-37 estA; putative esterase.
       0.514
KWZ73855.1
YbaK/EbsC protein; KEGG: pfe:PSF113_4576 4.7e-28 YbaK family protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
       0.483
nrdF
Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
       0.405
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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