STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73861.1Low molecular weight phosphotyrosine protein phosphatase; KEGG: kra:Krad_3711 1.0e-30 protein tyrosine phosphatase; K01104 protein-tyrosine phosphatase; Psort location: Cytoplasmic, score: 7.50; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (200 aa)    
Predicted Functional Partners:
KWZ74118.1
Glycosyl hydrolase family 32; KEGG: mph:MLP_06620 6.6e-29 putative glycoside hydrolase K01193; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.818
KWZ75175.1
Fructosamine kinase; KEGG: bbb:BIF_01743 2.6e-34 Fructosamine-3-kinase; Psort location: Cytoplasmic, score: 7.50.
 
     0.687
trxA
Thioredoxin; Psort location: Cytoplasmic, score: 9.97; Belongs to the thioredoxin family.
  
 
 0.647
trxA-2
Thioredoxin; KEGG: cva:CVAR_2990 4.9e-33 trxA; thioredoxin; Psort location: Cytoplasmic, score: 9.97; Belongs to the thioredoxin family.
  
 
 0.647
KWZ72982.1
Thioredoxin; KEGG: maf:MAF_13480 1.5e-22 thioredoxin K05838; Psort location: CytoplasmicMembrane, score: 9.55.
  
 
 0.647
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
   0.556
truA
Putative tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
   0.556
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
    
   0.553
rsmH
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
    
   0.553
KWZ73862.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.536
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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