STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73865.1NLPA lipoprotein; KEGG: pfe:PSF113_0025 3.8e-42 nlpA; protein NlpA K02073; Psort location: CytoplasmicMembrane, score: 9.68; Belongs to the nlpA lipoprotein family. (278 aa)    
Predicted Functional Partners:
KWZ73864.1
ABC transporter, permease protein; KEGG: pfe:PSF113_0026 2.0e-43 D-Methionine ABC transporter permease protein K02072; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
KWZ73863.1
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
 
 0.989
KWZ74770.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase; KEGG: jde:Jden_2111 2.0e-146 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740; Psort location: Cytoplasmic, score: 9.97.
  
    0.718
KWZ73866.1
Hypothetical protein.
       0.623
KWZ73867.1
Protein RssA domain protein, NTE family; KEGG: pfe:PSF113_1670 5.0e-56 protein patatin K07001; Psort location: Cytoplasmic, score: 7.50.
       0.614
KWZ74336.1
KEGG: ske:Sked_00590 1.9e-54 5,10-methylenetetrahydrofolate reductase; K00297 methylenetetrahydrofolate reductase (NADPH); Psort location: Cytoplasmic, score: 7.50.
  
  
 0.444
KWZ74829.1
Putative NADPH-ferredoxin reductase FprA; KEGG: ahe:Arch_1414 2.6e-162 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00528 ferredoxin--NADP+ reductase; Psort location: Cytoplasmic, score: 9.97.
   
    0.426
modB
Molybdate ABC transporter, permease protein; KEGG: krh:KRH_01730 5.9e-92 modB_modC; putative molybdenum ABC transporter; K02017 molybdate transport system ATP-binding protein K02018; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.415
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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