STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KWZ73885.1Iron chelate uptake ABC transporter, FeCT family, permease protein; KEGG: pfe:PSF113_4982 3.5e-46 Hemin ABC transporter, permease protein K02015; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (346 aa)    
Predicted Functional Partners:
KWZ73886.1
ABC transporter, ATP-binding protein; KEGG: rmu:RMDY18_11440 1.9e-54 cobalamin/Fe3+-siderophores ABC transporter ATPase; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
 
 0.993
KWZ73887.1
Periplasmic binding protein; KEGG: ttn:TTX_0257 0.0063 fepB1; Fe3+-hydroxamate ABC transporter periplasmic protein.
 
 
 0.982
KWZ74751.1
ABC transporter, ATP-binding protein; KEGG: dbr:Deba_0185 1.8e-51 ABC transporter; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.51.
 
 0.976
KWZ74749.1
Periplasmic binding protein; KEGG: ttn:TTX_0258 0.00037 fepB2; Fe3+-hydroxamate ABC transporter periplasmic protein K02016; Psort location: CytoplasmicMembrane, score: 9.51.
  
     0.771
KWZ73175.1
Putative iron(III) dicitrate ABC transporter, ATP-binding protein FecE; KEGG: pde:Pden_0297 3.4e-64 ABC transporter; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.655
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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