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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrBmethionine-R-sulfoxide reductase; KEGG: mcu:HMPREF0573_11685 4.1e-45 msrB; peptide-methionine (R)-S-oxide reductase K07305; Psort location: Cytoplasmic, score: 7.50. (134 aa)    
Predicted Functional Partners:
msrA
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 0.996
KWZ73585.1
Endonuclease/exonuclease/phosphatase family protein; KEGG: mad:HP15_3324 0.00075 endonuclease/exonuclease/phosphatase K06896.
       0.807
KWZ73583.1
Transporter, small conductance mechanosensitive ion channel MscS family protein; KEGG: eci:UTI89_C0735 7.1e-05 tolA; cell envelope integrity inner membrane protein TolA K03646; Psort location: CytoplasmicMembrane, score: 10.00.
       0.799
rplT
Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.755
rpmG
Ribosomal protein L33; KEGG: mmo:MMOB5490 2.1e-09 rpmG; 50S ribosomal protein L33 K02913; Belongs to the bacterial ribosomal protein bL33 family.
    
   0.725
rplK
Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
    
   0.725
rplL
Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
    
   0.725
rpsI
Ribosomal protein S9; KEGG: apb:SAR116_0492 4.8e-26 30S ribosomal protein S9 K02996; Psort location: Cytoplasmic, score: 9.67; Belongs to the universal ribosomal protein uS9 family.
    
   0.725
KWZ73185.1
Ribosomal protein L17; KEGG: apb:SAR116_2416 4.3e-18 50S ribosomal protein L17 K02879; Psort location: Cytoplasmic, score: 9.97; Belongs to the bacterial ribosomal protein bL17 family.
    
   0.725
rpsP
Ribosomal protein S16; KEGG: apb:SAR116_1817 2.7e-23 30S ribosomal protein S16 K02959; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bS16 family.
    
   0.725
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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