STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72883.1Dinuclear metal center protein, YbgI family; KEGG: hip:CGSHiEE_02770 2.6e-08 seryl-tRNA synthetase; Psort location: Cytoplasmic, score: 7.50. (292 aa)    
Predicted Functional Partners:
KWZ72882.1
Zinc ribbon domain protein; KEGG: edi:EDI_048910 5.3e-05 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.868
KWZ72235.1
Hypothetical protein; KEGG: bpd:BURPS668_A0945 0.00033 amylo-alpha-1,6-glucosidase.
    
   0.582
KWZ72884.1
KEGG: ahe:Arch_1171 3.7e-154 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K03885 NADH dehydrogenase; Psort location: CytoplasmicMembrane, score: 8.78.
       0.543
KWZ72885.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55; Belongs to the UPF0246 family.
       0.543
KWZ75328.1
Hsp20/alpha crystallin family protein; KEGG: apb:SAR116_0129 5.6e-09 molecular chaperone K13993; Belongs to the small heat shock protein (HSP20) family.
    
   0.434
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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