STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
xerCPhage integrase, SAM-like domain protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (300 aa)    
Predicted Functional Partners:
KWZ72910.1
KEGG: apb:SAR116_0616 7.2e-32 DNA protecting protein DprA K04096; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.845
KWZ73037.1
Phosphoribosyl transferase domain protein; KEGG: ccm:Ccan_18380 1.6e-05 protein COM101A; Psort location: Cytoplasmic, score: 7.50.
   
    0.816
KWZ72911.1
Mg chelatase-like protein; KEGG: bde:BDP_0806 1.7e-103 ATPase-like magnesium chelatase subunit ChlI K07391; Psort location: Cytoplasmic, score: 7.50.
       0.806
KWZ72912.1
Hypothetical protein; KEGG: sen:SACE_6045 2.4e-15 endonuclease K07460; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0102 family.
       0.806
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.776
KWZ72637.1
KEGG: bcv:Bcav_2151 3.3e-82 prephenate dehydrogenase; K04517 prephenate dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
  
    0.723
KWZ74362.1
KEGG: ame:408900 0.00024 protein tyrosine phosphatase 61F ortholog; K05696 protein tyrosine phosphatase, non-receptor type 1; Psort location: Cytoplasmic, score: 7.50; Belongs to the SOS response-associated peptidase family.
   
    0.711
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
   
    0.711
KWZ72513.1
FtsK/SpoIIIE family protein; KEGG: reh:H16_A1582 9.7e-108 h16_A1582; DNA translocase FtsK K03466; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the FtsK/SpoIIIE/SftA family.
  
   
 0.669
rplS
Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
   
   0.646
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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