close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72912.1Hypothetical protein; KEGG: sen:SACE_6045 2.4e-15 endonuclease K07460; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0102 family. (114 aa)    
Predicted Functional Partners:
KWZ72911.1
Mg chelatase-like protein; KEGG: bde:BDP_0806 1.7e-103 ATPase-like magnesium chelatase subunit ChlI K07391; Psort location: Cytoplasmic, score: 7.50.
 
    0.876
KWZ72910.1
KEGG: apb:SAR116_0616 7.2e-32 DNA protecting protein DprA K04096; Psort location: Cytoplasmic, score: 7.50.
  
    0.850
xerC
Phage integrase, SAM-like domain protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.807
KWZ72913.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.673
lepB
KEGG: jde:Jden_0990 1.0e-46 signal peptidase I; K03100 signal peptidase I; Psort location: CytoplasmicMembrane, score: 9.51; Belongs to the peptidase S26 family.
  
    0.647
KWZ72914.1
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.638
KWZ72908.1
Peptidase, M23 family; KEGG: aai:AARI_09630 4.8e-19 peptidase M23.
       0.539
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
       0.442
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.