STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72918.1Hypothetical protein; KEGG: art:Arth_0412 0.00049 alpha amylase; K01187 alpha-glucosidase. (355 aa)    
Predicted Functional Partners:
KWZ72980.1
Hypothetical protein; KEGG: art:Arth_0739 4.3e-47 glycogen branching protein; K00700 1,4-alpha-glucan branching enzyme; Psort location: Cytoplasmic, score: 7.50.
  
   0.487
KWZ74781.1
Putrescine-ornithine antiporter; KEGG: sgg:SGGBAA2069_c08160 1.4e-13 basic amino acid/polyamine antiporter K03294; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.425
KWZ74127.1
Amino acid permease; KEGG: pfe:PSF113_3872 2.4e-56 putrescine importer; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.425
KWZ72691.1
Hypothetical protein; KEGG: pfe:PSF113_3872 3.1e-17 putrescine importer; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.425
KWZ72136.1
Hypothetical protein; KEGG: ppo:PPM_1832 2.4e-104 ydaO1; putative O-acetyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.425
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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