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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72948.1Acyltransferase; KEGG: gpo:GPOL_c28780 3.8e-97 oatA; O-acetyltransferase OatA; Psort location: CytoplasmicMembrane, score: 10.00. (613 aa)    
Predicted Functional Partners:
KWZ74107.1
Hypothetical protein; KEGG: rop:ROP_22650 2.1e-19 acyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.775
KWZ72949.1
Hypothetical protein.
       0.773
KWZ74108.1
Hypothetical protein; KEGG: rop:ROP_22650 2.9e-34 acyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.769
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
       0.581
rpsT
Ribosomal protein S20; Binds directly to 16S ribosomal RNA.
       0.549
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.411
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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