STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72956.1comEA protein; KEGG: hor:Hore_06940 2.9e-06 glycogen/starch synthase K00703; Psort location: CytoplasmicMembrane, score: 9.51. (222 aa)    
Predicted Functional Partners:
KWZ72955.1
ComEC/Rec2-like protein; KEGG: apb:SAR116_0501 1.0e-10 DNA uptake protein ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.870
holA
KEGG: bcv:Bcav_1739 1.2e-75 DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta; Psort location: Cellwall, score: 8.19.
       0.823
KWZ72957.1
Aldose 1-epimerase; KEGG: agr:AGROH133_12875 2.4e-31 putative aldose-1-epimerase; Psort location: Cytoplasmic, score: 7.50.
       0.578
KWZ72953.1
Diaminopimelate dehydrogenase; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate.
       0.558
KWZ75276.1
KEGG: bbp:BBPR_0264 2.3e-103 endo-alpha-N-acetylgalactosaminidase, cellwall anchor protein family.
  
  
 0.523
KWZ73078.1
Cell envelope-like function transcriptional attenuator common domain protein; Psort location: CytoplasmicMembrane, score: 9.51.
 
     0.523
KWZ73242.1
Cell envelope-like function transcriptional attenuator common domain protein; Psort location: CytoplasmicMembrane, score: 9.51.
 
     0.522
KWZ72952.1
Hypothetical protein.
       0.479
KWZ72910.1
KEGG: apb:SAR116_0616 7.2e-32 DNA protecting protein DprA K04096; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.441
KWZ75060.1
Cell cycle protein, FtsW/RodA/SpoVE family; KEGG: cgo:Corgl_1656 1.4e-76 peptidoglycan glycosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
    0.419
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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