STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72965.1Membrane protein; KEGG: pfe:PSF113_4647 1.2e-15 integral membrane protein; Psort location: CytoplasmicMembrane, score: 10.00. (331 aa)    
Predicted Functional Partners:
KWZ72964.1
RDD family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.939
KWZ72962.1
Hypothetical protein; KEGG: cnc:CNE_2c16150 0.00038 MoxR-like ATPase; Psort location: CytoplasmicMembrane, score: 9.55.
 
  
 0.838
KWZ72960.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.87.
 
    0.787
KWZ72959.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
    0.786
KWZ72958.1
Hypothetical protein; KEGG: cby:CLM_1343 0.00057 glycerophosphoryl diester phosphodiesterase family protein; K01126 glycerophosphoryl diester phosphodiesterase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.773
KWZ72963.1
ErfK/YbiS/YcfS/YnhG.
       0.773
KWZ75571.1
FtsK/SpoIIIE family protein; KEGG: ppo:PPM_p0073 9.4e-16 topB; DNA topoisomerase III; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.474
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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