STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72968.1Iron dependent repressor, DNA binding domain protein; Psort location: Cytoplasmic, score: 9.97. (220 aa)    
Predicted Functional Partners:
KWZ72969.1
Vitamin K epoxide reductase family protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.810
KWZ74221.1
Putative modification methylase Eco57IB; KEGG: fps:FP1566 4.1e-68 modification methyltransferase.
   
    0.626
KWZ75627.1
KEGG: mcu:HMPREF0573_10471 2.1e-80 npdA; Sir2 family NAD-dependent deacetylase; Psort location: Cytoplasmic, score: 7.50.
   
    0.620
KWZ73863.1
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
   
   0.620
KWZ72151.1
Hypothetical protein.
   
    0.605
KWZ74473.1
KEGG: bya:BANAU_2956 1.1e-14 ytrA; GntR family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
   
    0.501
KWZ72705.1
Hypothetical protein; KEGG: ctt:CtCNB1_2836 0.0054 SOS-response transcriptional repressor, LexA; K01356 repressor LexA; Psort location: Cytoplasmic, score: 7.50.
   
  
 0.494
KWZ73098.1
Putative hydrogen peroxide-inducible protein activator; KEGG: mct:MCR_0286 3.8e-26 LysR family transcriptional regulator K04761; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.
   
 
 0.486
sufD
FeS assembly protein SufD; KEGG: apb:SAR116_0016 2.8e-29 Fe-S center production/stability protein SufD K09015; Psort location: Cytoplasmic, score: 7.50.
     
 0.463
KWZ72422.1
Manganese transport protein MntH; KEGG: bqy:MUS_0397 1.2e-10 ycsG; argininosuccinate synthase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.438
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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