STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ72973.1KEGG: cfi:Celf_2755 7.8e-74 cysteine desulfurase K04487; Psort location: Cytoplasmic, score: 9.97. (380 aa)    
Predicted Functional Partners:
KWZ72699.1
SUF system FeS assembly protein, NifU family.
  
 0.996
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
 
  
 0.928
KWZ74668.1
Hypothetical protein; KEGG: fpl:Ferp_2210 1.5e-08 SirA family protein; K04085 tRNA 2-thiouridine synthesizing protein A; Psort location: Cytoplasmic, score: 7.50; Belongs to the sulfur carrier protein TusA family.
   
 
 0.890
KWZ72162.1
KEGG: hiq:CGSHiGG_02350 1.7e-23 iron-sulfur cluster insertion protein ErpA K15724; Psort location: Cytoplasmic, score: 7.50; Belongs to the HesB/IscA family.
 
 
 0.866
KWZ75562.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.863
KWZ72975.1
KEGG: apb:SAR116_1870 7.3e-23 electron transfer flavoprotein subunit beta K03521; Psort location: Cytoplasmic, score: 7.50.
  
    0.807
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.797
KWZ72974.1
KEGG: apb:SAR116_1869 2.4e-31 electron transfer flavoprotein subunit alpha K03522; Psort location: Cytoplasmic, score: 7.50.
  
    0.791
KWZ73912.1
2-isopropylmalate synthase/homocitrate synthase family protein; KEGG: ske:Sked_10800 4.7e-147 2-isopropylmalate synthase; K01649 2-isopropylmalate synthase; Psort location: Cytoplasmic, score: 7.50; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 
  
 0.778
KWZ73879.1
ThiF family protein; KEGG: gpo:GPOL_c33730 1.7e-48 mOCS3; adenylyltransferase and sulfurtransferase MOCS3 K11996; Psort location: Cytoplasmic, score: 9.67.
   
 0.724
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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