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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73011.1KEGG: ctu:CTU_15090 1.2e-59 focA; formate transporter K06212; Psort location: CytoplasmicMembrane, score: 10.00. (261 aa)    
Predicted Functional Partners:
pflB
KEGG: ahe:Arch_0430 0. formate acetyltransferase K00656; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.693
pflA
Pyruvate formate-lyase 1-activating enzyme; KEGG: mcu:HMPREF0573_10298 3.6e-117 pflA; [formate-C-acetyltransferase]-activating enzyme K04069; Psort location: Cytoplasmic, score: 9.97.
    
 0.626
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
       0.538
argS
arginine--tRNA ligase; KEGG: ahe:Arch_0351 4.7e-202 arginyl-tRNA synthetase K01887; Psort location: Cytoplasmic, score: 9.97.
       0.538
KWZ73008.1
Homoserine dehydrogenase; KEGG: mcu:HMPREF0573_10380 3.3e-75 hom; homoserine dehydrogenase K00003.
       0.495
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
       0.492
KWZ73007.1
ACT domain protein; KEGG: ske:Sked_09870 6.6e-29 homoserine dehydrogenase; K00003 homoserine dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
       0.492
KWZ75638.1
KEGG: cur:cur_0825 1.6e-199 dmsA; dimethyl sulfoxide reductase chain A K07306; Psort location: Cytoplasmic, score: 9.97; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.490
KWZ75632.1
KEGG: mcu:HMPREF0573_11023 3.3e-297 dmsA; anaerobic dimethyl sulfoxide reductase subunit A K07306; Psort location: Cytoplasmic, score: 9.97; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.478
KWZ72702.1
Putative 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit; KEGG: mcu:HMPREF0573_11880 1.5e-13 nirD; putative nitrite reductase (NAD(P)H) small subunit K05710; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.449
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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