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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
whiB-3Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (100 aa)    
Predicted Functional Partners:
KWZ73048.1
Hypothetical protein; KEGG: bha:BH1667 0.0087 aroE; 3-phosphoshikimate 1-carboxyvinyltransferase K00800.
       0.837
KWZ73049.1
Putative ATP synthase F0, A subunit; KEGG: aai:AARI_07730 1.0e-47 glycosyl transferase family 2; Psort location: CytoplasmicMembrane, score: 10.00.
       0.837
KWZ72124.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
   
 0.835
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
   
 0.823
KWZ72913.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.770
KWZ74931.1
Hypothetical protein.
  
     0.767
KWZ72626.1
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.730
KWZ72531.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.723
KWZ74793.1
KEGG: mcu:HMPREF0573_10554 1.3e-55 gpmB; phosphoglycerate mutase; Psort location: Cytoplasmic, score: 7.50.
  
     0.705
KWZ74945.1
Putative hydrolase; Psort location: Cytoplasmic, score: 7.50.
  
     0.664
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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