STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73055.1Acyltransferase; KEGG: rop:ROP_22650 1.3e-66 acyltransferase; Psort location: CytoplasmicMembrane, score: 10.00. (694 aa)    
Predicted Functional Partners:
KWZ73056.1
Glycosyltransferase, group 2 family protein; KEGG: bsr:I33_3951 2.4e-15 glycosyl transferase, family 2, YwdF; Psort location: Cytoplasmic, score: 7.50.
       0.578
aspA
Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
       0.509
manA
KEGG: cfi:Celf_2525 3.7e-99 mannose-6-phosphate isomerase, class I K01809; Psort location: Cytoplasmic, score: 7.50.
       0.410
KWZ73053.1
Oxidoreductase, aldo/keto reductase family protein; KEGG: ppy:PPE_00905 7.0e-57 oxidoreductase; Psort location: Cytoplasmic, score: 9.97.
       0.410
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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