STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73061.1ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 10.00. (289 aa)    
Predicted Functional Partners:
KWZ73060.1
Putative O-antigen export system ATP-binding protein RfbB; KEGG: rsa:RSal33209_1615 1.5e-79 polysaccharide/polyol phosphate ABC transporter ATPase K09691; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 0.995
KWZ73233.1
KEGG: crd:CRES_0586 6.5e-54 ABC transporter ATP-binding protein K09691; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 0.981
KWZ73059.1
KEGG: gva:HMPREF0424_1180 6.5e-54 glycosyltransferase, group 2 family protein.
 
  
 0.905
glf
KEGG: bcv:Bcav_1171 3.0e-168 UDP-galactopyranose mutase K01854; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.883
KWZ73065.1
Glycosyltransferase, group 2 family protein; KEGG: pfr:PFREUD_00630 2.6e-66 gtfD; family 2 glycosyl transferase.
 
  
 0.829
KWZ73232.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.725
KWZ73066.1
Hypothetical protein.
  
  
 0.669
KWZ73063.1
KEGG: aai:AARI_14050 3.2e-22 glycosyl transferase family 28.
       0.524
KWZ73064.1
Oligosaccharide biosynthesis protein Alg14 like protein; KEGG: vvi:100262464 1.4e-10 UDP-N-acetylglucosamine transferase subunit ALG14 homolog-like; K07441 beta-1,4-N-acetylglucosaminyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.524
KWZ75335.1
CsbD-like protein; KEGG: ssr:SALIVB_0754 1.1e-05 putative manganese-dependent inorganic pyrophosphatase; Belongs to the UPF0337 (CsbD) family.
  
    0.405
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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