STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glfKEGG: bcv:Bcav_1171 3.0e-168 UDP-galactopyranose mutase K01854; Psort location: Cytoplasmic, score: 7.50. (394 aa)    
Predicted Functional Partners:
galE
KEGG: bni:BANAN_02400 1.4e-113 UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase; Psort location: Cytoplasmic, score: 9.97.
    
 0.965
KWZ73059.1
KEGG: gva:HMPREF0424_1180 6.5e-54 glycosyltransferase, group 2 family protein.
 
  
 0.958
KWZ73065.1
Glycosyltransferase, group 2 family protein; KEGG: pfr:PFREUD_00630 2.6e-66 gtfD; family 2 glycosyl transferase.
 
  
 0.908
KWZ73061.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.893
KWZ73060.1
Putative O-antigen export system ATP-binding protein RfbB; KEGG: rsa:RSal33209_1615 1.5e-79 polysaccharide/polyol phosphate ABC transporter ATPase K09691; Psort location: CytoplasmicMembrane, score: 9.96.
  
  
 0.855
KWZ75285.1
KEGG: pad:TIIST44_04260 3.9e-63 nucleotidyl transferase; K00973 glucose-1-phosphate thymidylyltransferase.
  
  
 0.854
KWZ74888.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.738
KWZ73085.1
Polysaccharide biosynthesis protein; KEGG: fal:FRAAL2062 4.4e-10 3-demethylubiquinone-9 3-O-methyltransferase K00568; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.738
KWZ73066.1
Hypothetical protein.
  
    0.579
KWZ73232.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.547
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.