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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73073.1Putative pleiotropic regulatory protein DegT; KEGG: mcu:HMPREF0573_11046 3.1e-134 stsC; pyridoxal-phosphate-dependent aminotransferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the DegT/DnrJ/EryC1 family. (366 aa)    
Predicted Functional Partners:
KWZ73245.1
Epimerase/dehydratase WbiI domain protein; KEGG: ase:ACPL_5540 7.2e-71 capD; polysaccharide biosynthesis protein CapD; Psort location: Cytoplasmic, score: 7.50.
 
 0.992
KWZ73072.1
Oxidoreductase, NAD-binding domain protein; KEGG: paw:PAZ_c01480 1.0e-94 iolG1; myo-inositol 2-dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
 
 0.991
KWZ73074.1
Bacterial transferase hexapeptide repeat protein; KEGG: ase:ACPL_3130 3.9e-63 Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
 0.955
KWZ73068.1
Nucleotide sugar dehydrogenase; KEGG: paw:PAZ_c01570 1.5e-171 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase; Psort location: Cytoplasmic, score: 9.97; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.880
KWZ72476.1
Haloacid dehalogenase-like hydrolase; KEGG: cms:CMS_2184 6.0e-28 hydrolase; K01091 phosphoglycolate phosphatase; Psort location: Cytoplasmic, score: 7.50.
    
  0.851
KWZ74746.1
Radical SAM domain protein; KEGG: cti:RALTA_B0668 7.1e-09 pqqE1; pyrroloquinoline quinone biosynthesis protein pqqe K06139; Psort location: Cytoplasmic, score: 7.50.
    
 0.841
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.
      0.753
KWZ73071.1
Glycosyltransferase, group 1 family protein; KEGG: krh:KRH_08960 2.3e-49 putative glycosyltransferase.
 
 
  0.752
KWZ73239.1
KEGG: krh:KRH_12670 1.3e-101 UDP-N-acetylglucosamine 2-epimerase K01791; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.741
KWZ75285.1
KEGG: pad:TIIST44_04260 3.9e-63 nucleotidyl transferase; K00973 glucose-1-phosphate thymidylyltransferase.
  
  
 0.736
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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