STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73104.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. (178 aa)    
Predicted Functional Partners:
KWZ73103.1
MgtE intracellular domain protein; KEGG: ccm:Ccan_15630 5.0e-20 magnesium transporter mgtE K06213; Psort location: Cytoplasmic, score: 7.50.
 
     0.914
KWZ73105.1
Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
       0.726
KWZ73102.1
Hypothetical protein.
       0.636
KWZ73106.1
Methyltransferase domain protein; KEGG: mph:MLP_42980 5.8e-46 putative methyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.544
typA
KEGG: bbp:BBPR_0603 2.0e-226 typA; GTP-binding protein TypA K06207; Psort location: Cytoplasmic, score: 9.97.
       0.406
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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