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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galKGalactokinase; KEGG: cfi:Celf_1150 9.9e-106 galactokinase; K00849 galactokinase; Psort location: Cytoplasmic, score: 7.50; Belongs to the GHMP kinase family. GalK subfamily. (406 aa)    
Predicted Functional Partners:
KWZ72957.1
Aldose 1-epimerase; KEGG: agr:AGROH133_12875 2.4e-31 putative aldose-1-epimerase; Psort location: Cytoplasmic, score: 7.50.
 
 0.988
galE
KEGG: bni:BANAN_02400 1.4e-113 UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase; Psort location: Cytoplasmic, score: 9.97.
 
 0.985
KWZ75149.1
Hypothetical protein; KEGG: pfr:PFREUD_08010 1.2e-118 galT; galactose-1-phosphate uridylyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
 0.966
KWZ72226.1
Beta galactosidase small chain; KEGG: cms:CMS_0924 1.4e-179 lacZ1; beta-galatosidase; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.749
rpsL
Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
      
 0.747
KWZ74393.1
Xylulokinase; KEGG: bcv:Bcav_3306 9.4e-117 xylulokinase; K00854 xylulokinase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.708
KWZ74135.1
Oxidoreductase, NAD-binding domain protein; KEGG: sen:SACE_2908 7.9e-65 dehydrogenase myo-inositol 2-dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
  
 0.682
iolG
Putative inositol 2-dehydrogenase; KEGG: pfr:PFREUD_19030 3.4e-105 iolG1; myo-inositol 2-dehydrogenase K00010; Psort location: Cytoplasmic, score: 7.50.
  
 0.682
iolG-2
Putative inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).
  
 0.682
KWZ73846.1
Oxidoreductase, NAD-binding domain protein; KEGG: paw:PAZ_c04800 2.9e-122 iolG2; myo-inositol 2-dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
  
 0.682
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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