STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73134.1KEGG: mcu:HMPREF0573_10281 6.5e-102 sdhB; succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240; Psort location: Cytoplasmic, score: 9.89. (253 aa)    
Predicted Functional Partners:
sdhA
KEGG: pfr:PFREUD_14310 1.4e-287 sdhA3; succinate dehydrogenase flavoprotein subunit K00239; Psort location: Cytoplasmic, score: 9.89.
 0.999
KWZ73136.1
Succinate dehydrogenase cytochrome B subunit, b558 family; KEGG: mcu:HMPREF0573_10283 1.3e-64 sdhC; succinate dehydrogenase subunit C K00241; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.996
kgd
KEGG: bcv:Bcav_1274 0. kgd; alpha-ketoglutarate decarboxylase; K00164 2-oxoglutarate dehydrogenase E1 component; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.991
sucD
succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
  
 0.989
KWZ74814.1
NADH-quinone oxidoreductase, E subunit; KEGG: mcu:HMPREF0573_10996 2.7e-80 nuoE; NADH dehydrogenase K00334; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.967
aspA
Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 0.960
KWZ74816.1
KEGG: ahe:Arch_0299 3.0e-239 NADH-quinone oxidoreductase subunit G; K00336 NADH-quinone oxidoreductase subunit G; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.950
KWZ74815.1
Putative NADH oxidoreductase, F subunit; KEGG: mcu:HMPREF0573_10997 1.2e-180 nuoF; NADH dehydrogenase K00335; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.945
KWZ73094.1
Citrate (Si)-synthase; KEGG: mcu:HMPREF0573_10956 9.2e-158 gltA; type II citrate synthase K01647; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.913
KWZ74973.1
KEGG: aai:AARI_26540 2.9e-138 gabD; succinate-semialdehyde dehydrogenase K00135; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.908
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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