STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73136.1Succinate dehydrogenase cytochrome B subunit, b558 family; KEGG: mcu:HMPREF0573_10283 1.3e-64 sdhC; succinate dehydrogenase subunit C K00241; Psort location: CytoplasmicMembrane, score: 10.00. (227 aa)    
Predicted Functional Partners:
sdhA
KEGG: pfr:PFREUD_14310 1.4e-287 sdhA3; succinate dehydrogenase flavoprotein subunit K00239; Psort location: Cytoplasmic, score: 9.89.
 
 
 0.999
KWZ73134.1
KEGG: mcu:HMPREF0573_10281 6.5e-102 sdhB; succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240; Psort location: Cytoplasmic, score: 9.89.
 
 
 0.998
sucD
succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
    
 0.926
sucC
succinate-CoA ligase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
    
 0.926
KWZ74131.1
KEGG: mcu:HMPREF0573_11823 1.5e-104 cydA; cytochrome bd ubiquinol oxidase subunit I K00425; Psort location: CytoplasmicMembrane, score: 10.00.
     
  0.499
cydB
KEGG: mcu:HMPREF0573_11824 6.0e-99 cydB; cytochrome bd ubiquinol oxidase subunit II K00426; Psort location: CytoplasmicMembrane, score: 10.00.
     
  0.499
KWZ72589.1
KEGG: mcu:HMPREF0573_11823 7.2e-135 cydA; cytochrome bd ubiquinol oxidase subunit I K00425; Psort location: CytoplasmicMembrane, score: 10.00.
     
  0.499
KWZ72396.1
FAH family protein; KEGG: cfl:Cfla_1199 1.1e-74 5-carboxymethyl-2-hydroxymuconate delta-isomerase; Psort location: Cytoplasmic, score: 7.50.
    
  0.439
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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