STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73151.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. (180 aa)    
Predicted Functional Partners:
KWZ73150.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
 
  
 0.986
KWZ73149.1
Hypothetical protein; KEGG: bcv:Bcav_0716 6.0e-51 pantoate/beta-alanine ligase.
       0.830
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
       0.777
KWZ73147.1
Beta-galactosidase GanA family protein; KEGG: dgo:DGo_PA0235 6.5e-130 bga; Glycoside hydrolase, family 42-like protein; K12308 beta-galactosidase; Psort location: Cytoplasmic, score: 7.50.
       0.641
KWZ73152.1
KEGG: bbp:BBPR_0653 1.7e-76 two-component response regulator K02483; Psort location: Cytoplasmic, score: 9.97.
       0.442
KWZ73153.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bcv:Bcav_0839 1.6e-98 histidine kinase K02484; Psort location: CytoplasmicMembrane, score: 9.96.
       0.442
rplM
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
       0.416
KWZ73154.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.409
ftsH
ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
  
    0.405
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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