STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73166.1Aminotransferase, class I/II; KEGG: bbp:BBPR_0680 4.8e-97 aminotransferase; Psort location: CytoplasmicMembrane, score: 8.16. (382 aa)    
Predicted Functional Partners:
KWZ73165.1
Hypothetical protein; KEGG: bba:Bd0515 2.9e-19 uroporphyrin-III C-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.668
KWZ74455.1
Phage minor structural protein; KEGG: ase:ACPL_342 5.1e-05 Pierisin.
  
     0.604
KWZ74273.1
Phage minor structural protein.
  
     0.541
KWZ73167.1
Shikimate kinase; KEGG: cfl:Cfla_0786 2.0e-45 thermoresistant glucokinase family carbohydrate kinase K00851; Psort location: Cytoplasmic, score: 7.50.
       0.520
KWZ73168.1
Transporter, gluconate:H+ symporter family; KEGG: eci:UTI89_C3106 8.3e-70 ygbN; inner membrane permease YgbN K03299; Psort location: CytoplasmicMembrane, score: 10.00.
       0.507
KWZ73164.1
5'-nucleotidase protein; KEGG: ahe:Arch_0203 2.4e-111 LPXTG-motif cell wall anchor domain-containing protein; K01081 5'-nucleotidase; Psort location: Cellwall, score: 9.20; Belongs to the 5'-nucleotidase family.
  
    0.489
KWZ74460.1
Cpl-7 lysozyme protein; KEGG: crd:CRES_0867 2.7e-112 N-acetylmuramoyl-L-alanine amidase.
  
    0.449
KWZ74277.1
Cpl-7 lysozyme protein.
  
    0.413
KWZ74454.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.402
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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