STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73179.1Hypothetical protein. (63 aa)    
Predicted Functional Partners:
KWZ72612.1
Hypothetical protein.
  
     0.610
KWZ72613.1
Hypothetical protein; KEGG: cnc:CNE_2c15860 9.6e-05 catC; muconolactone delta-isomerase CatC K09780.
  
     0.525
KWZ74475.1
Transcriptional regulator, TetR family; KEGG: cnc:CNE_2c15950 7.9e-06 codA; cytosine deaminase; Psort location: Cytoplasmic, score: 7.50.
  
     0.519
KWZ73178.1
Periplasmic binding protein; KEGG: ebe:B21_04119 5.3e-07 fecB; fecB, subunit of iron dicitrate ABC transporter and ferric dicitrate uptake system K02016; Psort location: CytoplasmicMembrane, score: 9.51.
       0.449
KWZ74978.1
Signal peptide protein, YSIRK family; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.431
KWZ73176.1
KEGG: bst:GYO_0597 6.9e-50 iron chelate uptake ABC transporter permease K02015; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.422
KWZ73177.1
KEGG: nmh:NMBH4476_1928 1.1e-65 iron chelate ABC transporter, permease protein K02015; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.419
KWZ73585.1
Endonuclease/exonuclease/phosphatase family protein; KEGG: mad:HP15_3324 0.00075 endonuclease/exonuclease/phosphatase K06896.
  
     0.405
KWZ73180.1
Glycerophosphodiester phosphodiesterase family protein; KEGG: pad:TIIST44_01995 3.9e-24 glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase; Psort location: Cytoplasmic, score: 9.97.
       0.403
KWZ73181.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.403
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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