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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aspA-2Aspartate ammonia-lyase; KEGG: pfr:PFREUD_16330 1.3e-181 aspA2; aspartate ammonia-lyase K01744; Psort location: Cytoplasmic, score: 9.97. (474 aa)    
Predicted Functional Partners:
KWZ72603.1
L-asparaginase, type I; KEGG: bde:BDP_0059 5.1e-102 L-asparaginase K01424; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.969
KWZ74836.1
Putative aspartate transaminase; KEGG: mcu:HMPREF0573_11145 2.9e-154 aspC; aspartate transaminase.
     
 0.964
kgd
KEGG: bcv:Bcav_1274 0. kgd; alpha-ketoglutarate decarboxylase; K00164 2-oxoglutarate dehydrogenase E1 component; Psort location: Cytoplasmic, score: 9.97.
     
 0.925
KWZ73094.1
Citrate (Si)-synthase; KEGG: mcu:HMPREF0573_10956 9.2e-158 gltA; type II citrate synthase K01647; Psort location: Cytoplasmic, score: 9.97.
     
 0.920
argH
KEGG: xce:Xcel_1333 1.3e-165 argininosuccinate lyase; K01755 argininosuccinate lyase; Psort location: Cytoplasmic, score: 7.50.
     
 0.918
argG
KEGG: cfi:Celf_1667 1.0e-181 argininosuccinate synthase K01940; Psort location: Cytoplasmic, score: 7.50; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
     
 0.918
KWZ74538.1
Putative adenylosuccinate lyase; Psort location: Cytoplasmic, score: 7.50.
     
 0.913
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.913
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
    
  0.913
sdhA
KEGG: pfr:PFREUD_14310 1.4e-287 sdhA3; succinate dehydrogenase flavoprotein subunit K00239; Psort location: Cytoplasmic, score: 9.89.
 
 
 0.892
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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