STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
KWZ73211.1Putative aerobic C4-dicarboxylate transport protein; KEGG: ctu:CTU_37370 6.6e-61 gltP; glutamate/aspartate:proton symporter K11102; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (455 aa)    
Predicted Functional Partners:
aspA-2
Aspartate ammonia-lyase; KEGG: pfr:PFREUD_16330 1.3e-181 aspA2; aspartate ammonia-lyase K01744; Psort location: Cytoplasmic, score: 9.97.
  
    0.697
kgd
KEGG: bcv:Bcav_1274 0. kgd; alpha-ketoglutarate decarboxylase; K00164 2-oxoglutarate dehydrogenase E1 component; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.441
KWZ73209.1
Cof-like hydrolase; KEGG: bbp:BBPR_1710 1.7e-37 hydrolase.
       0.432
KWZ72690.1
Universal stress family protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.417
KWZ73212.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: bme:BMEII0655 1.5e-132 alkaline phosphatase K01077.
       0.410
KWZ72691.1
Hypothetical protein; KEGG: pfe:PSF113_3872 3.1e-17 putrescine importer; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.407
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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