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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73257.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (411 aa)    
Predicted Functional Partners:
KWZ73258.1
ABC transporter, ATP-binding protein; KEGG: ase:ACPL_7235 1.3e-64 spermidine/putrescine import ATP-binding protein potA; Psort location: CytoplasmicMembrane, score: 8.78.
  
 0.980
KWZ73259.1
Hypothetical protein.
       0.521
KWZ73947.1
CAAX amino terminal protease family protein; KEGG: hne:HNE_2661 0.0085 S54 family peptidase K01362; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
  0.466
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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