STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73267.14-phosphoerythronate dehydrogenase; KEGG: gth:Geoth_3483 2.2e-44 Glyoxylate reductase (NADP(+)); Psort location: CytoplasmicMembrane, score: 8.16. (330 aa)    
Predicted Functional Partners:
KWZ75064.1
Hypothetical protein; KEGG: aai:AARI_25430 2.0e-19 aminodeoxychorismate synthase K13950; Psort location: CytoplasmicMembrane, score: 8.16.
  
 0.986
KWZ74766.1
FAD linked oxidase protein; KEGG: jde:Jden_2117 1.1e-275 D-lactate dehydrogenase K06911; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.889
trpB
Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
  
  0.882
trpA
Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
   
 
  0.876
KWZ72476.1
Haloacid dehalogenase-like hydrolase; KEGG: cms:CMS_2184 6.0e-28 hydrolase; K01091 phosphoglycolate phosphatase; Psort location: Cytoplasmic, score: 7.50.
    
 0.861
rplU
Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
   
   0.802
rpmA
Ribosomal protein L27; KEGG: apb:SAR116_1855 1.8e-17 50S ribosomal protein L27 K02899; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL27 family.
   
   0.802
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
   0.779
rplS
Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
  
 
   0.766
KWZ74792.1
HAD hydrolase, family IB; KEGG: crd:CRES_1952 2.3e-42 phosphoserine phosphatase; Psort location: Cytoplasmic, score: 7.50.
  
 0.763
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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