STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73269.1Hypothetical protein; KEGG: gvg:HMPREF0421_20853 7.5e-06 brp/Blh family beta-carotene 15,15'-monooxygenase; Psort location: CytoplasmicMembrane, score: 10.00. (469 aa)    
Predicted Functional Partners:
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
       0.821
sucD
succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
       0.692
sucC
succinate-CoA ligase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
       0.692
KWZ73049.1
Putative ATP synthase F0, A subunit; KEGG: aai:AARI_07730 1.0e-47 glycosyl transferase family 2; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.505
KWZ74858.1
Septum formation initiator; Psort location: CytoplasmicMembrane, score: 8.16.
  
   
 0.483
KWZ73048.1
Hypothetical protein; KEGG: bha:BH1667 0.0087 aroE; 3-phosphoshikimate 1-carboxyvinyltransferase K00800.
  
     0.466
KWZ72754.1
Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: bcv:Bcav_2236 1.2e-31 FKBP-type peptidylprolyl isomerase; K01802 peptidylprolyl isomerase; Psort location: Cytoplasmic, score: 7.50.
  
     0.419
KWZ74907.1
Aminopeptidase P domain protein; KEGG: ahe:Arch_1237 1.2e-171 peptidase M24; K01262 Xaa-Pro aminopeptidase; Psort location: Cytoplasmic, score: 9.97; Belongs to the peptidase M24B family.
  
     0.403
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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