STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73274.1Hypothetical protein; KEGG: aai:AARI_23710 4.0e-54 signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00. (376 aa)    
Predicted Functional Partners:
KWZ73273.1
Putative oxygen regulatory protein NreC; KEGG: bde:BDP_0499 5.3e-59 two-component response regulator; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.957
KWZ73275.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.718
pcrA
KEGG: cfi:Celf_1107 5.1e-228 ATP-dependent DNA helicase PcrA; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 9.97.
       0.494
KWZ73276.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.488
KWZ75318.1
KEGG: son:SO_0916 9.1e-05 MarR family transcriptional regulator; K03828 putative acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.438
KWZ75044.1
Efflux ABC transporter, permease protein; KEGG: ase:ACPL_5256 1.4e-60 Macrolide export ATP-binding/permease protein macB K02004; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.432
KWZ75261.1
Response regulator receiver domain protein; KEGG: ase:ACPL_6608 1.0e-39 Sensor protein vraS; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.425
KWZ75038.1
Response regulator receiver domain protein; KEGG: fal:FRAAL4813 5.2e-45 two-component system response regulator K07693; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.425
KWZ74176.1
Transcriptional regulator, LuxR family; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.425
KWZ72584.1
Response regulator receiver domain protein; KEGG: npu:Npun_R2420 9.4e-30 LuxR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.425
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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