STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWZ73275.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (416 aa)    
Predicted Functional Partners:
KWZ75275.1
PspA/IM30 family protein; KEGG: gga:416984 0.00051 CIT; citron (rho-interacting, serine/threonine kinase 21); K08282 non-specific serine/threonine protein kinase; Psort location: CytoplasmicMembrane, score: 9.51.
  
 
 0.883
KWZ73276.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.773
KWZ73274.1
Hypothetical protein; KEGG: aai:AARI_23710 4.0e-54 signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.718
KWZ73273.1
Putative oxygen regulatory protein NreC; KEGG: bde:BDP_0499 5.3e-59 two-component response regulator; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.572
KWZ74806.1
Trypsin; KEGG: bcv:Bcav_3234 1.7e-92 2-alkenal reductase; K08372 putative serine protease PepD.
  
  
 0.489
KWZ73277.1
Hypothetical protein; Psort location: Extracellular, score: 9.13.
       0.434
KWZ74174.1
PspC domain protein; Psort location: CytoplasmicMembrane, score: 9.55.
     
 0.432
Your Current Organism:
Winkia neuii
NCBI taxonomy Id: 33007
Other names: ATCC 51847, Actinomyces neuii, CCUG 32252, CIP 104015, DSM 8576, W. neuii, strain 97/90
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