Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KWZ72753.1 | lgt | HMPREF3198_01673 | HMPREF3198_01669 | Chorismate binding enzyme; KEGG: cfl:Cfla_1992 6.1e-145 anthranilate synthase component I K01657; Psort location: Cytoplasmic, score: 9.97. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.680 |
| KWZ72753.1 | pyk | HMPREF3198_01673 | HMPREF3198_01668 | Chorismate binding enzyme; KEGG: cfl:Cfla_1992 6.1e-145 anthranilate synthase component I K01657; Psort location: Cytoplasmic, score: 9.97. | Pyruvate kinase; KEGG: bcv:Bcav_2215 5.6e-183 pyruvate kinase K00873; Psort location: Cytoplasmic, score: 7.50. | 0.659 |
| KWZ72753.1 | trpA | HMPREF3198_01673 | HMPREF3198_01670 | Chorismate binding enzyme; KEGG: cfl:Cfla_1992 6.1e-145 anthranilate synthase component I K01657; Psort location: Cytoplasmic, score: 9.97. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.992 |
| KWZ72753.1 | trpB | HMPREF3198_01673 | HMPREF3198_01671 | Chorismate binding enzyme; KEGG: cfl:Cfla_1992 6.1e-145 anthranilate synthase component I K01657; Psort location: Cytoplasmic, score: 9.97. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.981 |
| KWZ72753.1 | trpC | HMPREF3198_01673 | HMPREF3198_01672 | Chorismate binding enzyme; KEGG: cfl:Cfla_1992 6.1e-145 anthranilate synthase component I K01657; Psort location: Cytoplasmic, score: 9.97. | KEGG: ssx:SACTE_1463 5.4e-82 Indole-3-glycerol-phosphate synthase K01609; Psort location: Cytoplasmic, score: 7.50; Belongs to the TrpC family. | 0.999 |
| KWZ74700.1 | KWZ74701.1 | HMPREF3198_00695 | HMPREF3198_00696 | Membrane protein insertase, YidC/Oxa1 family; KEGG: ptm:GSPATT00006636001 0.00047 hypothetical protein; K12735 peptidyl-prolyl cis-trans isomerase-like 4; Psort location: CytoplasmicMembrane, score: 10.00. | r3H domain protein; KEGG: sgg:SGGBAA2069_c20720 6.2e-14 jag; Jag family RNA-binding protein K06346; Psort location: Cytoplasmic, score: 7.50. | 0.976 |
| KWZ74700.1 | lgt | HMPREF3198_00695 | HMPREF3198_01669 | Membrane protein insertase, YidC/Oxa1 family; KEGG: ptm:GSPATT00006636001 0.00047 hypothetical protein; K12735 peptidyl-prolyl cis-trans isomerase-like 4; Psort location: CytoplasmicMembrane, score: 10.00. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.679 |
| KWZ74700.1 | trpA | HMPREF3198_00695 | HMPREF3198_01670 | Membrane protein insertase, YidC/Oxa1 family; KEGG: ptm:GSPATT00006636001 0.00047 hypothetical protein; K12735 peptidyl-prolyl cis-trans isomerase-like 4; Psort location: CytoplasmicMembrane, score: 10.00. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.678 |
| KWZ74701.1 | KWZ74700.1 | HMPREF3198_00696 | HMPREF3198_00695 | r3H domain protein; KEGG: sgg:SGGBAA2069_c20720 6.2e-14 jag; Jag family RNA-binding protein K06346; Psort location: Cytoplasmic, score: 7.50. | Membrane protein insertase, YidC/Oxa1 family; KEGG: ptm:GSPATT00006636001 0.00047 hypothetical protein; K12735 peptidyl-prolyl cis-trans isomerase-like 4; Psort location: CytoplasmicMembrane, score: 10.00. | 0.976 |
| KWZ74701.1 | lgt | HMPREF3198_00696 | HMPREF3198_01669 | r3H domain protein; KEGG: sgg:SGGBAA2069_c20720 6.2e-14 jag; Jag family RNA-binding protein K06346; Psort location: Cytoplasmic, score: 7.50. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.697 |
| KWZ74701.1 | trpA | HMPREF3198_00696 | HMPREF3198_01670 | r3H domain protein; KEGG: sgg:SGGBAA2069_c20720 6.2e-14 jag; Jag family RNA-binding protein K06346; Psort location: Cytoplasmic, score: 7.50. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.625 |
| lgt | KWZ72753.1 | HMPREF3198_01669 | HMPREF3198_01673 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Chorismate binding enzyme; KEGG: cfl:Cfla_1992 6.1e-145 anthranilate synthase component I K01657; Psort location: Cytoplasmic, score: 9.97. | 0.680 |
| lgt | KWZ74700.1 | HMPREF3198_01669 | HMPREF3198_00695 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Membrane protein insertase, YidC/Oxa1 family; KEGG: ptm:GSPATT00006636001 0.00047 hypothetical protein; K12735 peptidyl-prolyl cis-trans isomerase-like 4; Psort location: CytoplasmicMembrane, score: 10.00. | 0.679 |
| lgt | KWZ74701.1 | HMPREF3198_01669 | HMPREF3198_00696 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | r3H domain protein; KEGG: sgg:SGGBAA2069_c20720 6.2e-14 jag; Jag family RNA-binding protein K06346; Psort location: Cytoplasmic, score: 7.50. | 0.697 |
| lgt | lnt | HMPREF3198_01669 | HMPREF3198_02216 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. | 0.795 |
| lgt | lspA | HMPREF3198_01669 | HMPREF3198_01908 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.816 |
| lgt | pyk | HMPREF3198_01669 | HMPREF3198_01668 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Pyruvate kinase; KEGG: bcv:Bcav_2215 5.6e-183 pyruvate kinase K00873; Psort location: Cytoplasmic, score: 7.50. | 0.791 |
| lgt | rsmH | HMPREF3198_01669 | HMPREF3198_01893 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.666 |
| lgt | trpA | HMPREF3198_01669 | HMPREF3198_01670 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.998 |
| lgt | trpB | HMPREF3198_01669 | HMPREF3198_01671 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.993 |
page 1 of 3